The detailed information of tRNA gene sequence


Sequence ID>ENV08002078
Genome IDABOL01109818
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 94
End posion on genome 19
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctcgcggctt
tRNA gene sequence 
GGCCCCTTAGCTCAGTGGTTAGAGCAGGCGACTCATAATCGCTTGGTCGTTGGTTCAAAC
CCAACAGGGGCCACCA
Downstream region at tRNA end position 
aatttttgct
Secondary structure (Cloverleaf model)
>ENV08002078	Met	CAT
                   t      ACCA aatttttgct
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          C A
                    T     C A A C C     A
      T G A        A      | | | | |     A
    G       C T C G       G T T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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