The detailed information of tRNA gene sequence


Sequence ID>ENV08002079
Genome IDABOL01115397
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 109
End posion on genome 33
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
nnnncactat
tRNA gene sequence 
GGCCGGGTAGCTCAGTTGGTAGTAGCGTTCGCCTGAAAAGTGAAAGGTCACCGGTTCGAC
CCCGGTCCCGGCCACCT
Downstream region at tRNA end position 
tgcggaatag
Secondary structure (Cloverleaf model)
>ENV08002079	Phe	GAA
                   t      ACCT tgcggaatag
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          C C
                    T     T G G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C C G G     C
    G         | | |                 T T
    G       T A G C
      T A G        G     AGGTC
                    T - A
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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