The detailed information of tRNA gene sequence


Sequence ID>ENV08002107
Genome IDABOL01191832
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 103
End posion on genome 27
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
nnacctccaa
tRNA gene sequence 
CGGGGTGTGGCGCAGCTTGGTAGCGCGCGTCGTTCGGGACGACGAGGCCGCAGGTTCAAA
TCCTGTCACCCCGACCA
Downstream region at tRNA end position 
gaaagagccc
Secondary structure (Cloverleaf model)
>ENV08002107	Pro	CGG
                   a      ACCA gaaagagccc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGCC
                    C - G
                    G - C
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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