The detailed information of tRNA gene sequence


Sequence ID>ENV08002108
Genome IDABOL01192699
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 21
End posion on genome 94
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
ccttggtcgc
tRNA gene sequence 
GCGGGTGTAGCTCAATGGTAGAGCAGAAGCTTCCCAAGCTTACGACGAGGGTTCGATTCC
CTTCACCCGCTCCA
Downstream region at tRNA end position 
ttttcgtgaa
Secondary structure (Cloverleaf model)
>ENV08002108	Gly	CCC
                   c      TCCA ttttcgtgaa
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T T C C C     A
        A A        A      + | | | |     G
      T     C T C G       G A G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     CGAC
                    G   A
                    A - T
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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