The detailed information of tRNA gene sequence


Sequence ID>ENV08002122
Genome IDABOL01223195
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 84
End posion on genome 10
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gcgacggtga
tRNA gene sequence 
GGGCGTATAGCTCAGGCGGTTAGAGCGCTTCGCTGATAACGAAGAGGTCCCAAGTTCAAG
TCTTGGTACGCCCACtc
Downstream region at tRNA end position 
ccaccacnnn
Secondary structure (Cloverleaf model)
>ENV08002122	Ile	GAT
                   a      ACtc ccaccacnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     A - T          T G
                    T     G G T T C     A
      G G A        A      | | | | |     A
    C       C T C G       C C A A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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