The detailed information of tRNA gene sequence


Sequence ID>ENV08002130
Genome IDABOL01252839
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 36
End posion on genome 108
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
catccgtcga
tRNA gene sequence 
GTCCCGGTCGTCCAGAGGCCTAGGACACCGCCCTTTCAAGGCGGCAACGCGGGTTCGAAT
CCCGTCCGGGATAnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08002130	Glu	TTC
                   a      Annn nnnnnnnnnn
                     G + T
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T G C C C     A
      A G A        C      + | | | |     G
    G       C C T G       G C G G G     C
    G       | | | |                 T T
    C       G G A C
      C T A        A     CAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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