The detailed information of tRNA gene sequence


Sequence ID>ENV08002132
Genome IDABOL01258260
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 34
End posion on genome 107
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
cactagggga
tRNA gene sequence 
GCCCCCGTAGCTCAGATGGTTAGAGCAGCGGACTTTTAATCCGCGGGTCCTGGGTTCGAG
TCCCAGTGGGGGCAnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08002132	Lys	TTT
                   a      Annn nnnnnnnnnn
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     G + T          T G
                    T     G A C C C     A
      A G A        A      | | | | |     G
    T       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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