The detailed information of tRNA gene sequence


Sequence ID>ENV08002147
Genome IDABOL01301425
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 14
End posion on genome 89
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
gctgcgcgtt
tRNA gene sequence 
GCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTCGATT
CCGAGTCCGGGCACCA
Downstream region at tRNA end position 
tattcagaag
Secondary structure (Cloverleaf model)
>ENV08002147	Phe	GAA
                   t      ACCA tattcagaag
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          T T
                    T     G A G C C     A
      T G A        A      | | + | |     G
    C       C T C G       C T T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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