The detailed information of tRNA gene sequence


Sequence ID>ENV08002150
Genome IDABOL01310667
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 32
End posion on genome 105
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gcgacggtga
tRNA gene sequence 
GGGCGTATAGCTCAGGCGGTTAGAGCGCTTCGCTGATAACGAAGAGGTCCCAAGTTCAAG
TCTTGGTACGCCCAnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08002150	Ile	GAT
                   a      Annn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     A - T          T G
                    T     G G T T C     A
      G G A        A      | | | | |     A
    C       C T C G       C C A A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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