The detailed information of tRNA gene sequence


Sequence ID>ENV08002156
Genome IDABOL01331226
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 92
End posion on genome 18
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
gtgatatcat
tRNA gene sequence 
GGCCTCGTAGTACAATGGATAGTATAAGAGTTTCCGAAGCTCCAGATTCAGGTTCGATTC
CTGACGAGGCTACAA
Downstream region at tRNA end position 
aagaagaaac
Secondary structure (Cloverleaf model)
>ENV08002156	Arg	CCG
                   t      ACAA aagaagaaac
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T T
                    T     A G T C C     A
      T A A        A      | | | | |     G
    G       C A T G       T C A G G     C
    G       | | | +                 T T
    A       G T A T
      T A          A     AGAT
                    A   C
                    G - C
                    A - T
                    G - C
                    T + G
                  T       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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