The detailed information of tRNA gene sequence


Sequence ID>ENV08002161
Genome IDABOL01358996
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 10
End posion on genome 83
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ngaggtccac
tRNA gene sequence 
GGGGCATTGGCGCAGTTGGTAGCGCGGCTGCTTTGCAAGCAGTAGGTCAGGGGTTCGAGT
CCCCTATGCTCCACgt
Downstream region at tRNA end position 
aagatgagaa
Secondary structure (Cloverleaf model)
>ENV08002161	Ala	TGC
                   c      ACgt aagatgagaa
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     A - T
                     T - A          T G
                    T     T C C C C     A
      T G A        G      | | | | |     G
    T       C G C G       A G G G G     C
    G       | | | |                 T T
    G       G C G C
      T A          G     AGGTC
                    G + T
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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