The detailed information of tRNA gene sequence


Sequence ID>ENV08002162
Genome IDABOL01376237
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 101
End posion on genome 26
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
nnnnnnnnna
tRNA gene sequence 
GGGGCTTTAGCTCAGCTGGGAGAGCGGTTGCTTTGCAAGCATCAGGTCGTCGGTTCGATC
CCGACAAGCTCCACCA
Downstream region at tRNA end position 
ctctttttta
Secondary structure (Cloverleaf model)
>ENV08002162	Ala	TGC
                   a      ACCA ctctttttta
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     T - A          C T
                    T     C A G C C     A
      C G A        A      | | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    G - C
                    T   T
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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