Sequence ID | >ENV08002179 |
Genome ID | ABOL01476378 |
Phylum/Class | mosquito metagenome; viral fraction from mixed species mosquitoes collected in Mission Valley in San Diego, CA |
Species | |
Start position on genome
|
90
|
End posion on genome
|
17
|
Amino Acid
|
Thr
|
Anticodon
|
GGT
|
Upstream region at tRNA start position
|
nnnntccgtt
|
tRNA gene sequence
|
GCCCCTATAGCTCAGTAGGCAGAGCGTCTCCATGGTAAGGAGAAGGTCAGCAGTTCGATT CTGCTTGGGGGCTCtg
|
Downstream region at tRNA end position
|
agtgtgaatc
|
Secondary structure (Cloverleaf model) | >ENV08002179 Thr GGT
t TCtg agtgtgaatc
G - C
C - G
C - G
C - G
C - G
T + G
A - T T T
T T C G T C A
T G A A | | | | | G
A C T C G A G C A G C
G | | | | T T
G G A G C
C A G AGGTC
T - A
C - G
T - A
C - G
C - G
A A
T A
G G T
|
Intron | |
Comment/Decision | |
Genome/Seq. Info. | [ENA] |