The detailed information of tRNA gene sequence


Sequence ID>ENV08002192
Genome IDABOM01013905
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 7
End posion on genome 80
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
nnnnttacat
tRNA gene sequence 
TGAGACTTGGTATAGCGGTATTACACTTGACTTTGACTCAAGTAATATAGGTTCAACTCC
TATAGTCTCAACTA
Downstream region at tRNA end position 
acctaaactg
Secondary structure (Cloverleaf model)
>ENV08002192	Gln	TTG
                   t      ACTA acctaaactg
                     T - A
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     T - A          T C
                    T     T A T C C     A
        G A        G      | | | | |     A
      C     T A T G       A T A G G     C
      G       | | |                 T T
      G     T T A C
        T A        A     TAAT
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       C
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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