The detailed information of tRNA gene sequence


Sequence ID>ENV08002196
Genome IDABOM01022732
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 33
End posion on genome 105
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
ccagttttat
tRNA gene sequence 
GCGAGTGTAGTATAGTGGCTGATCACGGCGGATTGCCAATTCGCAGACACGGGTTCAATT
CCCGTCACTCGTTnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08002196	Gly	GCC
                   t      Tnnn nnnnnnnnnn
                     G + T
                     C - G
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T T
                    T     T G C C C     A
      T G A        A      | | | | |     A
    G       T A T G       A C G G G     C
    G           | |                 T T
    C       T C A C
      T G A        G     AGAC
                    G - C
                    C - G
                    G - C
                    G + T
                    A - T
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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