The detailed information of tRNA gene sequence


Sequence ID>ENV08002198
Genome IDABON01003457
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 112
End posion on genome 38
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
cccacggagt
tRNA gene sequence 
GCGGGCGTAGCTCAGGGGTAGAGCATCACCTTGCCAAGGTGAGGGTCGAGGGTTCGAATC
CCTTCGCCCGCTCCA
Downstream region at tRNA end position 
gtcgaaaagg
Secondary structure (Cloverleaf model)
>ENV08002198	Gly	GCC
                   t      TCCA gtcgaaaagg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T T C C C     A
        G A        A      + | | | |     G
      G     C T C G       G A G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    T - A
                    C - G
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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