The detailed information of tRNA gene sequence


Sequence ID>ENV08002200
Genome IDABON01008835
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 17
End posion on genome 89
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
gtttttagtt
tRNA gene sequence 
GCGGGCATAGCTCAGTGGTAGAGCGCAACCTTGCCAAGGTTGATGTCGCGCGTTCGAATC
GCGTTGCCCGCTCtt
Downstream region at tRNA end position 
taaaaaatta
Secondary structure (Cloverleaf model)
>ENV08002200	Gly	GCC
                   t      TCtt taaaaaatta
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     T G C G C     A
        G A        A      + | | | |     G
      T     C T C G       G C G C G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     ATGTC
                    C - G
                    A - T
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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