The detailed information of tRNA gene sequence


Sequence ID>ENV08002202
Genome IDABON01009470
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 19
End posion on genome 93
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
taagaattta
tRNA gene sequence 
GGACCATTAGCTTCAGTTGGTTAGAGCGCACGCTTGATAAGCGTGAGGTCACTGGTTCAA
GTCCAGTATGGTCCAggt
Downstream region at tRNA end position 
ttttctttat
Secondary structure (Cloverleaf model)
>ENV08002202	Ile	GAT
                   a      Aggt ttttctttat
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     T G A C C     A
    T G A C        A      | | | | |     A
  T         T T C G       A C T G G     C
  G         + | | |                 T T
  G         G A G C
    T T A          G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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