The detailed information of tRNA gene sequence


Sequence ID>ENV08002204
Genome IDABON01010986
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 85
End posion on genome 12
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aagattcaaa
tRNA gene sequence 
GGGCTATTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCTCTGGTTCAAA
TCCAGAATGGCCCGaac
Downstream region at tRNA end position 
gggggtatnn
Secondary structure (Cloverleaf model)
>ENV08002204	Ile	GAT
                   a      Gaac gggggtatnn
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     A - T
                     T - A          T A
                    T     A G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       T C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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