The detailed information of tRNA gene sequence


Sequence ID>ENV08002205
Genome IDABON01020856
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 103
End posion on genome 31
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
nnnnctttct
tRNA gene sequence 
ACGGGCATAGTACAACGGTTAGTATAGAGGTCTCCAAAACCTTTGATCTGGGTTCGAATC
CTAGTGCCCGTGCtg
Downstream region at tRNA end position 
atgaatacca
Secondary structure (Cloverleaf model)
>ENV08002205	Trp	CCA
                   t      GCtg atgaatacca
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G A T C C     A
      C A A        A      | | + | |     G
    G       C A T G       C T G G G     C
    G       | | | +                 T T
    T       G T A T
      T A          A     TGAT
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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