The detailed information of tRNA gene sequence


Sequence ID>ENV08002207
Genome IDABON01024198
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 101
End posion on genome 27
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
nnnncgatac
tRNA gene sequence 
GCCCCTGTAGCACAGTGGTAGTGCAGTCGCCTTGTAAGCGGAAGGTCGCGGGTTCAAATC
CTGCCGGGGGCACCA
Downstream region at tRNA end position 
ttcgcactgg
Secondary structure (Cloverleaf model)
>ENV08002207	Thr	TGT
                   c      ACCA ttcgcactgg
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     C G T C C     A
        G A        A      | | + | |     A
      T     C A C G       G C G G G     C
      G     | | | |                 T T
      G     G T G C
        T A        A     AGGTC
                    G   A
                    T + G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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