The detailed information of tRNA gene sequence


Sequence ID>ENV08002209
Genome IDABON01033366
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 88
End posion on genome 13
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gcactggaac
tRNA gene sequence 
GGGGCCGTAGCTCAGCTGGGAGAGCGCGTCGTTCGCAATGACGAGGTCAGGGGTTCGATC
CCCCTCGGCTCCACCA
Downstream region at tRNA end position 
gtgcattgat
Secondary structure (Cloverleaf model)
>ENV08002209	Ala	CGC
                   c      ACCA gtgcattgat
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          C T
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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