The detailed information of tRNA gene sequence


Sequence ID>ENV08002211
Genome IDABON01035543
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 22
End posion on genome 94
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ttttactttt
tRNA gene sequence 
GCCTGCTTAACTCAATCGGTAGAGTATCGGTTTTGTAAACCGAAGGTTATCGGTTCAACT
CCGATAGTAGGCTttt
Downstream region at tRNA end position 
aatatnnnnn
Secondary structure (Cloverleaf model)
>ENV08002211	Thr	TGT
                   t      Tttt aatatnnnnn
                     G - C
                     C - G
                     C - G
                     T - A
                     G + T
                     C - G
                     T - A          T C
                    T     T A G C C     A
      T A A        A      | | | | |     A
    C       C T C A       A T C G G     C
    G       | | | |                 T T
    G       G A G T
      T A          A     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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