The detailed information of tRNA gene sequence


Sequence ID>ENV08002212
Genome IDABON01036407
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 20
End posion on genome 95
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
agttcaggtg
tRNA gene sequence 
GGGTGCTTAGCTCAGCTGGTAGAGCAGCGCCCTTACAAGGCGCGGGTCGGCGGTTCGATC
CCGTCAGCACCCACCA
Downstream region at tRNA end position 
ccaccgannn
Secondary structure (Cloverleaf model)
>ENV08002212	Val	TAC
                   g      ACCA ccaccgannn
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     T - A          C T
                    T     C T G C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    G - C
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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