The detailed information of tRNA gene sequence


Sequence ID>ENV08002215
Genome IDABPP01000036
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 01; altitude 310m AMSL; sample depth 1m below water level, 0-1mm depth into the mat
Species
Start position on genome 101
End posion on genome 25
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gcgccacggt
tRNA gene sequence 
CGGAGTGTAGCTCAGCCTGGTAGAGCACTGTCTTCGGGAGGCAGGGGCCGGAGGTTCGAA
TCCTCTCACTCCGACCA
Downstream region at tRNA end position 
ttttcacgac
Secondary structure (Cloverleaf model)
>ENV08002215	Pro	CGG
                   t      ACCA ttttcacgac
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C T C G       G G A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGCC
                    C - G
                    T - A
                    G - C
                    T + G
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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