The detailed information of tRNA gene sequence


Sequence ID>ENV08002227
Genome IDABPP01002175
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 01; altitude 310m AMSL; sample depth 1m below water level, 0-1mm depth into the mat
Species
Start position on genome 527
End posion on genome 453
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
cgacacgcag
tRNA gene sequence 
GCGGGCGTAGTTCAGTGGTAGAACGTCAGCTTCCCAAGCTGAATGTCGTCGGTTCGATCC
CGATCGCCCGCTCCA
Downstream region at tRNA end position 
gtccccccgt
Secondary structure (Cloverleaf model)
>ENV08002227	Gly	CCC
                   g      TCCA gtccccccgt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          C T
                    T     T A G C C     A
        G A        A      + | | | |     G
      T     C T T G       G T C G G     C
      G     | | | |                 T T
      G     G A A C
        T A        G     ATGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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