The detailed information of tRNA gene sequence


Sequence ID>ENV08002238
Genome IDABPP01005283
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 01; altitude 310m AMSL; sample depth 1m below water level, 0-1mm depth into the mat
Species
Start position on genome 637
End posion on genome 565
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
aagtacccaa
tRNA gene sequence 
GGGCATGTAGCTCAGTGGATAGAGCATCAGATTCCGGTTCTGAGGGTCGGGGGTTCGAAT
CCCTCCATGCTCGttg
Downstream region at tRNA end position 
acctagcgtt
Secondary structure (Cloverleaf model)
>ENV08002238	Arg	CCG
                   a      Gttg acctagcgtt
                     G - C
                     G + T
                     G - C
                     C - G
                     A - T
                     T - A
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     G
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    A       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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