The detailed information of tRNA gene sequence


Sequence ID>ENV08002239
Genome IDABPP01005358
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 01; altitude 310m AMSL; sample depth 1m below water level, 0-1mm depth into the mat
Species
Start position on genome 197
End posion on genome 271
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aatactgcaT
tRNA gene sequence 
GGGGCTATAGCTCAGCTGGTAGAGCACCTCAATGGCATTGAGGGGGTCAGCGGTTCGAGT
CCGCTTAGCTCCATat
Downstream region at tRNA end position 
cacacataac
Secondary structure (Cloverleaf model)
>ENV08002239	Ala	GGC
                   T      ATat cacacataac
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          T G
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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