The detailed information of tRNA gene sequence


Sequence ID>ENV08002248
Genome IDABPP01006442
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 01; altitude 310m AMSL; sample depth 1m below water level, 0-1mm depth into the mat
Species
Start position on genome 312
End posion on genome 237
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
cgcgccgcgt
tRNA gene sequence 
GGGCCCGTAGCTCAGTTGGTAGAGCAGCTGACTTTTAATCAGCGGGTCACAGGTTCGAAT
CCTGTCGGGCTCACCA
Downstream region at tRNA end position 
tccttttcag
Secondary structure (Cloverleaf model)
>ENV08002248	Lys	TTT
                   t      ACCA tccttttcag
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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