The detailed information of tRNA gene sequence


Sequence ID>ENV08002262
Genome IDABPP01011507
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 01; altitude 310m AMSL; sample depth 1m below water level, 0-1mm depth into the mat
Species
Start position on genome 353
End posion on genome 280
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
caagcccttc
tRNA gene sequence 
GGCGAGTTGGCGGAGTGGTTACGCAGCGGATTGCAAATCCGTGTACGCCGGTTCGATTCC
GGCACTCGCCTCCA
Downstream region at tRNA end position 
tttgactcta
Secondary structure (Cloverleaf model)
>ENV08002262	Cys	GCA
                   c      TCCA tttgactcta
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     T - A          T T
                    T     C G G C C     A
        G A        G      | | | | |     G
      T     G G C G       G C C G G     C
      G       | | |                 T T
      G     A C G C
        T T        A     GTAC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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