The detailed information of tRNA gene sequence


Sequence ID>ENV08002267
Genome IDABPP01011657
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 01; altitude 310m AMSL; sample depth 1m below water level, 0-1mm depth into the mat
Species
Start position on genome 556
End posion on genome 482
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ggggcaaact
tRNA gene sequence 
GGCGCGGTAGCTCAATTGGTTAGAGCCCCGGACTGTCGATCCGGAGGTTGCGGGTTCGAG
TCCCGTCCGCGTCGCtt
Downstream region at tRNA end position 
catccgctgg
Secondary structure (Cloverleaf model)
>ENV08002267	Asp	GTC
                   t      GCtt catccgctgg
                     G - C
                     G + T
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T A A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        C     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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