The detailed information of tRNA gene sequence


Sequence ID>ENV08002281
Genome IDABPQ01002090
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 02; altitude 310m AMSL; sample depth 1m below water level, 1-2mm depth into the mat
Species
Start position on genome 575
End posion on genome 501
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
aatgatccat
tRNA gene sequence 
TGGGGCGTCGCCAAGAGGTAAGGCACTGGGTTTTGATCCCAGCATTCCCAGGTTCGAATC
CTGGCGCCCCAGCCA
Downstream region at tRNA end position 
cacttcacca
Secondary structure (Cloverleaf model)
>ENV08002281	Gln	TTG
                   t      GCCA cacttcacca
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     G G T C C     A
        G A        C      | | | | |     G
      A     A C C G       C C A G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATTC
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  T       T
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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