The detailed information of tRNA gene sequence


Sequence ID>ENV08002302
Genome IDABPQ01008677
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 02; altitude 310m AMSL; sample depth 1m below water level, 1-2mm depth into the mat
Species
Start position on genome 613
End posion on genome 538
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
gagtaacacT
tRNA gene sequence 
CGGGGCGTAGCGCAGCTTGGTAGCGCACCACTTTGGGGTAGTGGGGGTCGTGGGTTCAAA
TCCCGCCGCTCCGATtt
Downstream region at tRNA end position 
gatttcaaga
Secondary structure (Cloverleaf model)
>ENV08002302	Pro	GGG
                   T      ATtt gatttcaaga
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | + | | |     A
    T       C G C G       G T G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    T - A
                  T       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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