The detailed information of tRNA gene sequence


Sequence ID>ENV08002314
Genome IDABPR01000394
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 03; altitude 310m AMSL; sample depth 1m below water level, 2-3mm depth into the mat
Species
Start position on genome 770
End posion on genome 846
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aaatccttag
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGTGGTTCAAA
TCCACCCAGGCCCACCA
Downstream region at tRNA end position 
cgtggggaat
Secondary structure (Cloverleaf model)
>ENV08002314	Ile	GAT
                   g      ACCA cgtggggaat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C C A C C     A
      T G A        A      | | | | |     A
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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