The detailed information of tRNA gene sequence


Sequence ID>ENV08002379
Genome IDABPS01009676
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 04; altitude 310m AMSL; sample depth 1m below water level, 3-4mm depth into the mat
Species
Start position on genome 345
End posion on genome 419
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
actatgatgg
tRNA gene sequence 
GCGGGAGTAGTTCAGTGGTGGAACGCAAGCTTCCCAAGCTTGATGTCGCGGGTTCGATCC
CCGTCTCCCGCTCCA
Downstream region at tRNA end position 
gtataaagtg
Secondary structure (Cloverleaf model)
>ENV08002379	Gly	CCC
                   g      TCCA gtataaagtg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          C T
                    T     T G C C C     A
        G A        A      + | | | |     G
      T     C T T G       G C G G G     C
      G     | | | |                 T T
      G     G A A C
        T G        G     ATGTC
                    C - G
                    A - T
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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