The detailed information of tRNA gene sequence


Sequence ID>ENV08002397
Genome IDABPT01001183
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 05; altitude 310m AMSL; sample depth 1m below water level, 4-5mm depth into the mat
Species
Start position on genome 793
End posion on genome 718
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
nnnncggttc
tRNA gene sequence 
GCCCAGGTAGCTCAGTTGGTAGAGCAGCGGATTGAAAATCCGCGTGTCGGTGGTTCGATT
CCGCCCCTGGGCACCA
Downstream region at tRNA end position 
tttttctcaa
Secondary structure (Cloverleaf model)
>ENV08002397	Phe	GAA
                   c      ACCA tttttctcaa
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C          T T
                    T     C C G C C     A
      T G A        A      | | + | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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