The detailed information of tRNA gene sequence


Sequence ID>ENV08002427
Genome IDABPU01000184
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 06; altitude 310m AMSL; sample depth 1m below water level, 5-6mm depth into the mat
Species
Start position on genome 554
End posion on genome 626
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ttagacaagc
tRNA gene sequence 
GGGGGATTAGCTCAGTTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGACC
CCGCTATCCTCCAtaa
Downstream region at tRNA end position 
ccggcgttnn
Secondary structure (Cloverleaf model)
>ENV08002427	Ala	TGC
                   c      Ataa ccggcgttnn
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     T - A          C C
                    T     T C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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