The detailed information of tRNA gene sequence


Sequence ID>ENV08002447
Genome IDABPU01006479
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 06; altitude 310m AMSL; sample depth 1m below water level, 5-6mm depth into the mat
Species
Start position on genome 452
End posion on genome 527
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
catctaagtt
tRNA gene sequence 
GGGCGCTTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGGGGGTCATAGGTTCGAGC
CCTATAGCGCCCACCA
Downstream region at tRNA end position 
aaaaagccat
Secondary structure (Cloverleaf model)
>ENV08002447	Val	TAC
                   t      ACCA aaaaagccat
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A          C G
                    T     T A T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A T A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T + G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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