The detailed information of tRNA gene sequence


Sequence ID>ENV08002453
Genome IDABPU01008054
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 06; altitude 310m AMSL; sample depth 1m below water level, 5-6mm depth into the mat
Species
Start position on genome 451
End posion on genome 522
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gtcttcaaag
tRNA gene sequence 
GGTCTCGTGGCCGAGTGGCTAGGCAGTGGTCTGCAAAACCATCTACAGCGGTTCGAATCC
GCTCGAGACCTCag
Downstream region at tRNA end position 
agtgacaaat
Secondary structure (Cloverleaf model)
>ENV08002453	Cys	GCA
                   g      TCag agtgacaaat
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     T C G C C     A
        G A        G      | | | | |     G
      T     G C C G       A G C G G     C
      G       | | |                 T T
      G     A G G C
        C T        A     CTAC
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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