The detailed information of tRNA gene sequence


Sequence ID>ENV08002474
Genome IDABPV01000690
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 07; altitude 310m AMSL; sample depth 1m below water level, 6-10mm depth into the mat
Species
Start position on genome 474
End posion on genome 546
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
gctctttttt
tRNA gene sequence 
GCCGATGTAGCTCAGGGGTAGAGCGTTTCCTTGGTAAGGAAGAGGTCACGGGTTCAATTC
CCGTCATCGGCTCag
Downstream region at tRNA end position 
ttacagaaga
Secondary structure (Cloverleaf model)
>ENV08002474	Thr	GGT
                   t      TCag ttacagaaga
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T T
                    T     T G C C C     A
        G A        A      | | | | |     A
      G     C T C G       A C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGTC
                    T + G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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