The detailed information of tRNA gene sequence


Sequence ID>ENV08002513
Genome IDABPW01003045
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 08; altitude 310m AMSL; sample depth 1m below water level, 10-22mm depth into the mat
Species
Start position on genome 673
End posion on genome 749
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cgtcaatcat
tRNA gene sequence 
GGGCCGGTAGCTCAGGTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGAGGTTCAAG
TCCTCCTCGGCCCACCA
Downstream region at tRNA end position 
atttgtcaac
Secondary structure (Cloverleaf model)
>ENV08002513	Ile	GAT
                   t      ACCA atttgtcaac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T          T G
                    T     C C T C C     A
      G G A        A      | | | | |     A
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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