The detailed information of tRNA gene sequence


Sequence ID>ENV08002551
Genome IDABPX01002278
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 09; altitude 310m AMSL; sample depth 1m below water level, 22-34mm depth into the mat
Species
Start position on genome 281
End posion on genome 355
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
cccacggaat
tRNA gene sequence 
GCGGGTGTAGCTCAGGGGTAGAGCACAACCTTGCCAAGGTTGGGGTCGTGGGTTCGAATC
CCATCGCCCGCTCCA
Downstream region at tRNA end position 
ttaaagacga
Secondary structure (Cloverleaf model)
>ENV08002551	Gly	GCC
                   t      TCCA ttaaagacga
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     T A C C C     A
        G A        A      + | | | |     G
      G     C T C G       G T G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    A - T
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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