The detailed information of tRNA gene sequence


Sequence ID>ENV08002556
Genome IDABPX01004270
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 09; altitude 310m AMSL; sample depth 1m below water level, 22-34mm depth into the mat
Species
Start position on genome 816
End posion on genome 740
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aagcgcccac
tRNA gene sequence 
GGGGGTGTAGCTCAGTCGGTTAGAGCGCTGGCCTGTCACGCCAGAGGCCGCGGGTTCGAG
TCCCGTCACTCCCGCCA
Downstream region at tRNA end position 
tcgaccgcgt
Secondary structure (Cloverleaf model)
>ENV08002556	Asp	GTC
                   c      GCCA tcgaccgcgt
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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