The detailed information of tRNA gene sequence


Sequence ID>ENV08002558
Genome IDABPX01004654
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 09; altitude 310m AMSL; sample depth 1m below water level, 22-34mm depth into the mat
Species
Start position on genome 281
End posion on genome 354
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
agaacgccgc
tRNA gene sequence 
GCGGGCATGGTGAAATGGTATCACACGAGCCTTCCAAGCTCTTGGTGCGGGTTCGATTCC
CGCTGCCCGCTCCA
Downstream region at tRNA end position 
tcccccgcgc
Secondary structure (Cloverleaf model)
>ENV08002558	Gly	TCC
                   c      TCCA tcccccgcgc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T T
                    T     C G C C C     A
        A A        G      | | | | |     G
      T     A G T G       G C G G G     C
      G     | | | |                 T T
      G     T C A C
        T A        A     TGGT
                    C   T
                    G - C
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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