The detailed information of tRNA gene sequence


Sequence ID>ENV08002569
Genome IDABPX01007991
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 09; altitude 310m AMSL; sample depth 1m below water level, 22-34mm depth into the mat
Species
Start position on genome 785
End posion on genome 710
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ctggacgcca
tRNA gene sequence 
GCCCCTATAGCTCAGCTGGTAGAGCATCTGATTTGTAATCAGAGGGTCGGGAGTTCGAGT
CTCTCTGGGGGCACCA
Downstream region at tRNA end position 
tgatagtcag
Secondary structure (Cloverleaf model)
>ENV08002569	Thr	TGT
                   a      ACCA tgatagtcag
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     C T C T C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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