The detailed information of tRNA gene sequence


Sequence ID>WENV170116878
Genome IDCENH01045677
Search identical group
Phylum/Class[CENH] marine metagenome genome assembly TARA_030_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 593
End posion on genome 688
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aaaattatat
tRNA gene sequence 
GGCGACGTTTGAATAGCTGGTGCTTTCCGCGGCCTTCAAAGCCGTAGTGTAGTAGTTGAT
ACTACAGGTGGGTTCGATTCCTATCCGTCGCCGCAA
Downstream region at tRNA end position 
aaaaaaannn
Secondary structure (Cloverleaf model)
>WENV170116878	SeC	TCA
                   t      GCAA aaaaaaannn
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C
                     T   C          T T
                    T     T A T C C     A
      C G A        T      + | + | |     G
    T       T A A G       G T G G G     C
    G         | | |                 T T
    G       T T T C
      T G C        C     AGTGTAGTAGTTGATACTACAG
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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