The detailed information of tRNA gene sequence


Sequence ID>WENV170117139
Genome IDCENI01048072
Search identical group
Phylum/Class[CENI] marine metagenome genome assembly TARA_023_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 360
End posion on genome 437
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gggacactaa
tRNA gene sequence 
GGGTCCATAGCATAATTGGTGAATGCAACCGCCTCATAAGCGGAAGATTTCTCGGTTCGA
GTCCGAGTGGACCCACCA
Downstream region at tRNA end position 
tttatctttt
Secondary structure (Cloverleaf model)
>WENV170117139	Met	CAT
                   a      ACCA tttatctttt
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     A - T          T G
                    T     G A G C C     A
      T A A        A      | | | | |     G
    T       T A C G       C T C G G     C
    G       | | | |                 T T
    G       A T G C
      T G A        A     AGATTT
                    A   A
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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