The detailed information of tRNA gene sequence


Sequence ID>WENV170121183
Genome IDCENL01054720
Search identical group
Phylum/Class[CENL] marine metagenome genome assembly TARA_025_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 23728
End posion on genome 23654
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position
ataccggaaa
tRNA gene sequence
GGGCGTATAGCTCAGTTGGCTAGAGCGCTGCCGTCACATGGCAGAGGTCACTGGTTCGAG
TCCAGTTACGCCCACtt
Downstream region at tRNA end position
tcttcgatat
Secondary structure (Cloverleaf model)
>WENV170121183	Val	CAC
                   a      ACtt tcttcgatat
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     A - T          T G
                    T     T G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  G       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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