The detailed information of tRNA gene sequence


Sequence ID>WENV170121539
Genome IDCENM01039632
Search identical group
Phylum/Class[CENM] marine metagenome genome assembly TARA_032_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 185
End posion on genome 109
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cgaattaagt
tRNA gene sequence 
CGGGGCATAGCGCAGTCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGGGAGTTCGAA
TCTCTCTGCCCCGACCA
Downstream region at tRNA end position 
cttcttaact
Secondary structure (Cloverleaf model)
>WENV170121539	Pro	TGG
                   t      ACCA cttcttaact
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     C T C T C     A
      T G A        A      | + | | |     G
    C       C G C G       G G G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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