The detailed information of tRNA gene sequence


Sequence ID>WENV170130127
Genome IDCENQ01190799
Search identical group
Phylum/Class[CENQ] marine metagenome genome assembly TARA_031_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 294
End posion on genome 219
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position
ctttttcgtt
tRNA gene sequence
GGGCGCTTAGCTCAGCTGGGAGAGCGACGGTCTTACAAACCGTAGGTCACAAGTTCGATC
CTTGTAGCGCCCACCA
Downstream region at tRNA end position
ctcccaatga
Secondary structure (Cloverleaf model)
>WENV170130127	Val	TAC
                   t      ACCA ctcccaatga
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A          C T
                    T     T G T T C     A
      C G A        A      | | | | |     G
    T       C T C G       A C A A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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